OpenSwathChromatogramExtractor: command not found

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/OpenSwathChromatogramExtractor - from package: topp

You may install the required package with command apt-get install {package}

Error in other languages:
OpenSwathChromatogramExtractor: bevel nie gevind nie
OpenSwathChromatogramExtractor: comandă negăsită
OpenSwathChromatogramExtractor: comando não encontrado
OpenSwathChromatogramExtractor: commande introuvable
OpenSwathChromatogramExtractor: command not found
OpenSwathChromatogramExtractor: käsku ei ole
OpenSwathChromatogramExtractor: không tìm thấy lệnh
OpenSwathChromatogramExtractor: komanda nerasta
OpenSwathChromatogramExtractor: Kommando nicht gefunden.
OpenSwathChromatogramExtractor: kommandot finns inte
OpenSwathChromatogramExtractor: komut yok
OpenSwathChromatogramExtractor: nie znaleziono polecenia
OpenSwathChromatogramExtractor: níor aimsíodh an t-ordú
OpenSwathChromatogramExtractor: no se encontró la orden
OpenSwathChromatogramExtractor: no s'ha trobat l'ordre
OpenSwathChromatogramExtractor: opdracht niet gevonden
OpenSwathChromatogramExtractor: parancs nem található
OpenSwathChromatogramExtractor: perintah tidak ditemukan
OpenSwathChromatogramExtractor: príkaz nenájdený
OpenSwathChromatogramExtractor: příkaz nenalezen
OpenSwathChromatogramExtractor: команда не найдена
OpenSwathChromatogramExtractor: командата не е открита
OpenSwathChromatogramExtractor: 命令找不到
OpenSwathChromatogramExtractor: コマンドが見つかりません