fit_affine_xform_landmarks: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/lib/cmtk/bin/fit_affine_xform_landmarks - from package: cmtk

You may install the required package with command apt-get install {package}
Error in other languages:
fit_affine_xform_landmarks: bevel nie gevind nie
fit_affine_xform_landmarks: comandă negăsită
fit_affine_xform_landmarks: comando não encontrado
fit_affine_xform_landmarks: commande introuvable
fit_affine_xform_landmarks: command not found
fit_affine_xform_landmarks: käsku ei ole
fit_affine_xform_landmarks: không tìm thấy lệnh
fit_affine_xform_landmarks: komanda nerasta
fit_affine_xform_landmarks: Kommando nicht gefunden.
fit_affine_xform_landmarks: kommandot finns inte
fit_affine_xform_landmarks: komut yok
fit_affine_xform_landmarks: nie znaleziono polecenia
fit_affine_xform_landmarks: níor aimsíodh an t-ordú
fit_affine_xform_landmarks: no se encontró la orden
fit_affine_xform_landmarks: no s'ha trobat l'ordre
fit_affine_xform_landmarks: opdracht niet gevonden
fit_affine_xform_landmarks: parancs nem található
fit_affine_xform_landmarks: perintah tidak ditemukan
fit_affine_xform_landmarks: príkaz nenájdený
fit_affine_xform_landmarks: příkaz nenalezen
fit_affine_xform_landmarks: команда не найдена
fit_affine_xform_landmarks: командата не е открита
fit_affine_xform_landmarks: 命令找不到
fit_affine_xform_landmarks: コマンドが見つかりません