assemblyget: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/assemblyget - from package: emboss

You may install the required package with command apt-get install {package}
Error in other languages:
assemblyget: bevel nie gevind nie
assemblyget: comandă negăsită
assemblyget: comando não encontrado
assemblyget: commande introuvable
assemblyget: command not found
assemblyget: käsku ei ole
assemblyget: không tìm thấy lệnh
assemblyget: komanda nerasta
assemblyget: Kommando nicht gefunden.
assemblyget: kommandot finns inte
assemblyget: komut yok
assemblyget: nie znaleziono polecenia
assemblyget: níor aimsíodh an t-ordú
assemblyget: no se encontró la orden
assemblyget: no s'ha trobat l'ordre
assemblyget: opdracht niet gevonden
assemblyget: parancs nem található
assemblyget: perintah tidak ditemukan
assemblyget: príkaz nenájdený
assemblyget: příkaz nenalezen
assemblyget: команда не найдена
assemblyget: командата не е открита
assemblyget: 命令找不到
assemblyget: コマンドが見つかりません