ontogetcommon: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/ontogetcommon - from package: emboss

You may install the required package with command apt-get install {package}
Error in other languages:
ontogetcommon: bevel nie gevind nie
ontogetcommon: comandă negăsită
ontogetcommon: comando não encontrado
ontogetcommon: commande introuvable
ontogetcommon: command not found
ontogetcommon: käsku ei ole
ontogetcommon: không tìm thấy lệnh
ontogetcommon: komanda nerasta
ontogetcommon: Kommando nicht gefunden.
ontogetcommon: kommandot finns inte
ontogetcommon: komut yok
ontogetcommon: nie znaleziono polecenia
ontogetcommon: níor aimsíodh an t-ordú
ontogetcommon: no se encontró la orden
ontogetcommon: no s'ha trobat l'ordre
ontogetcommon: opdracht niet gevonden
ontogetcommon: parancs nem található
ontogetcommon: perintah tidak ditemukan
ontogetcommon: príkaz nenájdený
ontogetcommon: příkaz nenalezen
ontogetcommon: команда не найдена
ontogetcommon: командата не е открита
ontogetcommon: 命令找不到
ontogetcommon: コマンドが見つかりません