tpbconv_d: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/tpbconv_d - from package: gromacs

You may install the required package with command apt-get install {package}
Error in other languages:
tpbconv_d: bevel nie gevind nie
tpbconv_d: comandă negăsită
tpbconv_d: comando não encontrado
tpbconv_d: commande introuvable
tpbconv_d: command not found
tpbconv_d: käsku ei ole
tpbconv_d: không tìm thấy lệnh
tpbconv_d: komanda nerasta
tpbconv_d: Kommando nicht gefunden.
tpbconv_d: kommandot finns inte
tpbconv_d: komut yok
tpbconv_d: nie znaleziono polecenia
tpbconv_d: níor aimsíodh an t-ordú
tpbconv_d: no se encontró la orden
tpbconv_d: no s'ha trobat l'ordre
tpbconv_d: opdracht niet gevonden
tpbconv_d: parancs nem található
tpbconv_d: perintah tidak ditemukan
tpbconv_d: príkaz nenájdený
tpbconv_d: příkaz nenalezen
tpbconv_d: команда не найдена
tpbconv_d: командата не е открита
tpbconv_d: 命令找不到
tpbconv_d: コマンドが見つかりません