mkdssp: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On CentOS possible default full paths are:

/usr/bin/mkdssp - from package: dssp

You may install the required package with command yum install {package}

On Debian possible default full paths are:

/usr/bin/mkdssp - from package: dssp

You may install the required package with command apt-get install {package}
Error in other languages:
mkdssp: bevel nie gevind nie
mkdssp: comandă negăsită
mkdssp: comando não encontrado
mkdssp: commande introuvable
mkdssp: command not found
mkdssp: käsku ei ole
mkdssp: không tìm thấy lệnh
mkdssp: komanda nerasta
mkdssp: Kommando nicht gefunden.
mkdssp: kommandot finns inte
mkdssp: komut yok
mkdssp: nie znaleziono polecenia
mkdssp: níor aimsíodh an t-ordú
mkdssp: no se encontró la orden
mkdssp: no s'ha trobat l'ordre
mkdssp: opdracht niet gevonden
mkdssp: parancs nem található
mkdssp: perintah tidak ditemukan
mkdssp: príkaz nenájdený
mkdssp: příkaz nenalezen
mkdssp: команда не найдена
mkdssp: командата не е открита
mkdssp: 命令找不到
mkdssp: コマンドが見つかりません