mipe2putativesbeprimers: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/mipe2putativesbeprimers - from package: mipe

You may install the required package with command apt-get install {package}
Error in other languages:
mipe2putativesbeprimers: bevel nie gevind nie
mipe2putativesbeprimers: comandă negăsită
mipe2putativesbeprimers: comando não encontrado
mipe2putativesbeprimers: commande introuvable
mipe2putativesbeprimers: command not found
mipe2putativesbeprimers: käsku ei ole
mipe2putativesbeprimers: không tìm thấy lệnh
mipe2putativesbeprimers: komanda nerasta
mipe2putativesbeprimers: Kommando nicht gefunden.
mipe2putativesbeprimers: kommandot finns inte
mipe2putativesbeprimers: komut yok
mipe2putativesbeprimers: nie znaleziono polecenia
mipe2putativesbeprimers: níor aimsíodh an t-ordú
mipe2putativesbeprimers: no se encontró la orden
mipe2putativesbeprimers: no s'ha trobat l'ordre
mipe2putativesbeprimers: opdracht niet gevonden
mipe2putativesbeprimers: parancs nem található
mipe2putativesbeprimers: perintah tidak ditemukan
mipe2putativesbeprimers: príkaz nenájdený
mipe2putativesbeprimers: příkaz nenalezen
mipe2putativesbeprimers: команда не найдена
mipe2putativesbeprimers: командата не е открита
mipe2putativesbeprimers: 命令找不到
mipe2putativesbeprimers: コマンドが見つかりません