bp_make_mrna_protein: command not found

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/bp_make_mrna_protein - from package: bioperl

You may install the required package with command apt-get install {package}

Error in other languages:
bp_make_mrna_protein: bevel nie gevind nie
bp_make_mrna_protein: comandă negăsită
bp_make_mrna_protein: comando não encontrado
bp_make_mrna_protein: commande introuvable
bp_make_mrna_protein: command not found
bp_make_mrna_protein: käsku ei ole
bp_make_mrna_protein: không tìm thấy lệnh
bp_make_mrna_protein: komanda nerasta
bp_make_mrna_protein: Kommando nicht gefunden.
bp_make_mrna_protein: kommandot finns inte
bp_make_mrna_protein: komut yok
bp_make_mrna_protein: nie znaleziono polecenia
bp_make_mrna_protein: níor aimsíodh an t-ordú
bp_make_mrna_protein: no se encontró la orden
bp_make_mrna_protein: no s'ha trobat l'ordre
bp_make_mrna_protein: opdracht niet gevonden
bp_make_mrna_protein: parancs nem található
bp_make_mrna_protein: perintah tidak ditemukan
bp_make_mrna_protein: príkaz nenájdený
bp_make_mrna_protein: příkaz nenalezen
bp_make_mrna_protein: команда не найдена
bp_make_mrna_protein: командата не е открита
bp_make_mrna_protein: 命令找不到
bp_make_mrna_protein: コマンドが見つかりません