vdb-copy.2: command not found

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/vdb-copy.2 - from package: sra-toolkit

You may install the required package with command apt-get install {package}

Error in other languages:
vdb-copy.2: bevel nie gevind nie
vdb-copy.2: comandă negăsită
vdb-copy.2: comando não encontrado
vdb-copy.2: commande introuvable
vdb-copy.2: command not found
vdb-copy.2: käsku ei ole
vdb-copy.2: không tìm thấy lệnh
vdb-copy.2: komanda nerasta
vdb-copy.2: Kommando nicht gefunden.
vdb-copy.2: kommandot finns inte
vdb-copy.2: komut yok
vdb-copy.2: nie znaleziono polecenia
vdb-copy.2: níor aimsíodh an t-ordú
vdb-copy.2: no se encontró la orden
vdb-copy.2: no s'ha trobat l'ordre
vdb-copy.2: opdracht niet gevonden
vdb-copy.2: parancs nem található
vdb-copy.2: perintah tidak ditemukan
vdb-copy.2: príkaz nenájdený
vdb-copy.2: příkaz nenalezen
vdb-copy.2: команда не найдена
vdb-copy.2: командата не е открита
vdb-copy.2: 命令找不到
vdb-copy.2: コマンドが見つかりません