create-diff.sh: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/share/doc/r-cran-qtl/examples/bin/scripts/create-diff.sh - from package: r-cran-qtl

You may install the required package with command apt-get install {package}
Error in other languages:
create-diff.sh: bevel nie gevind nie
create-diff.sh: comandă negăsită
create-diff.sh: comando não encontrado
create-diff.sh: commande introuvable
create-diff.sh: command not found
create-diff.sh: käsku ei ole
create-diff.sh: không tìm thấy lệnh
create-diff.sh: komanda nerasta
create-diff.sh: Kommando nicht gefunden.
create-diff.sh: kommandot finns inte
create-diff.sh: komut yok
create-diff.sh: nie znaleziono polecenia
create-diff.sh: níor aimsíodh an t-ordú
create-diff.sh: no se encontró la orden
create-diff.sh: no s'ha trobat l'ordre
create-diff.sh: opdracht niet gevonden
create-diff.sh: parancs nem található
create-diff.sh: perintah tidak ditemukan
create-diff.sh: príkaz nenájdený
create-diff.sh: příkaz nenalezen
create-diff.sh: команда не найдена
create-diff.sh: командата не е открита
create-diff.sh: 命令找不到
create-diff.sh: コマンドが見つかりません