makemat: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/makemat - from package: blast2

You may install the required package with command apt-get install {package}
Error in other languages:
makemat: bevel nie gevind nie
makemat: comandă negăsită
makemat: comando não encontrado
makemat: commande introuvable
makemat: command not found
makemat: käsku ei ole
makemat: không tìm thấy lệnh
makemat: komanda nerasta
makemat: Kommando nicht gefunden.
makemat: kommandot finns inte
makemat: komut yok
makemat: nie znaleziono polecenia
makemat: níor aimsíodh an t-ordú
makemat: no se encontró la orden
makemat: no s'ha trobat l'ordre
makemat: opdracht niet gevonden
makemat: parancs nem található
makemat: perintah tidak ditemukan
makemat: príkaz nenájdený
makemat: příkaz nenalezen
makemat: команда не найдена
makemat: командата не е открита
makemat: 命令找不到
makemat: コマンドが見つかりません