gpsprune: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/gpsprune - from package: gpsprune

You may install the required package with command apt-get install {package}
Error in other languages:
gpsprune: bevel nie gevind nie
gpsprune: comandă negăsită
gpsprune: comando não encontrado
gpsprune: commande introuvable
gpsprune: command not found
gpsprune: käsku ei ole
gpsprune: không tìm thấy lệnh
gpsprune: komanda nerasta
gpsprune: Kommando nicht gefunden.
gpsprune: kommandot finns inte
gpsprune: komut yok
gpsprune: nie znaleziono polecenia
gpsprune: níor aimsíodh an t-ordú
gpsprune: no se encontró la orden
gpsprune: no s'ha trobat l'ordre
gpsprune: opdracht niet gevonden
gpsprune: parancs nem található
gpsprune: perintah tidak ditemukan
gpsprune: príkaz nenájdený
gpsprune: příkaz nenalezen
gpsprune: команда не найдена
gpsprune: командата не е открита
gpsprune: 命令找不到
gpsprune: コマンドが見つかりません