binlinks: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH
/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/share/circos/tools/binlinks/bin/binlinks - from package: circos-tools

You may install the required package with command apt-get install {package}
Error in other languages:
binlinks: bevel nie gevind nie
binlinks: comandă negăsită
binlinks: comando não encontrado
binlinks: commande introuvable
binlinks: command not found
binlinks: käsku ei ole
binlinks: không tìm thấy lệnh
binlinks: komanda nerasta
binlinks: Kommando nicht gefunden.
binlinks: kommandot finns inte
binlinks: komut yok
binlinks: nie znaleziono polecenia
binlinks: níor aimsíodh an t-ordú
binlinks: no se encontró la orden
binlinks: no s'ha trobat l'ordre
binlinks: opdracht niet gevonden
binlinks: parancs nem található
binlinks: perintah tidak ditemukan
binlinks: príkaz nenájdený
binlinks: příkaz nenalezen
binlinks: команда не найдена
binlinks: командата не е открита
binlinks: 命令找不到
binlinks: コマンドが見つかりません