SpectraFilterNLargest: command not found

Have You tried accessing the binary with the full path?

Maybe Your $PATH variable doesn't contain the default paths? echo $PATH should give something like:

[root@server ~]# echo $PATH

If it's empty, You may set the PATH variable with this command

export PATH="/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin"

On Debian possible default full paths are:

/usr/bin/SpectraFilterNLargest - from package: topp

You may install the required package with command apt-get install {package}
Error in other languages:
SpectraFilterNLargest: bevel nie gevind nie
SpectraFilterNLargest: comandă negăsită
SpectraFilterNLargest: comando não encontrado
SpectraFilterNLargest: commande introuvable
SpectraFilterNLargest: command not found
SpectraFilterNLargest: käsku ei ole
SpectraFilterNLargest: không tìm thấy lệnh
SpectraFilterNLargest: komanda nerasta
SpectraFilterNLargest: Kommando nicht gefunden.
SpectraFilterNLargest: kommandot finns inte
SpectraFilterNLargest: komut yok
SpectraFilterNLargest: nie znaleziono polecenia
SpectraFilterNLargest: níor aimsíodh an t-ordú
SpectraFilterNLargest: no se encontró la orden
SpectraFilterNLargest: no s'ha trobat l'ordre
SpectraFilterNLargest: opdracht niet gevonden
SpectraFilterNLargest: parancs nem található
SpectraFilterNLargest: perintah tidak ditemukan
SpectraFilterNLargest: príkaz nenájdený
SpectraFilterNLargest: příkaz nenalezen
SpectraFilterNLargest: команда не найдена
SpectraFilterNLargest: командата не е открита
SpectraFilterNLargest: 命令找不到
SpectraFilterNLargest: コマンドが見つかりません